Mark, I've had 5 go bad, all on ReSTored. Found all four torn after a trip in 2009. Bike ran poorly but got me to Illinois and back home. Mileage was down and wouldn't pull beyond 80 MPH. Replaced all four, then found another one bad some months later. That was on a 91 with >150K miles. Still blame Iowa gas for that one.
I wouldn't do a prophylactic change, too expensive. You might try what I did, tho, buy a set of used carbs just for the diaphragms and keep'em in limbo 'til ya need them. I have three spares now in a zip lock in my closet. STrayCatt did the same and has'em avilable.
I bought a really crappy set of carbs from Don, had been under water for a while so not even worth salvaging EXCEPT for the diaphragms. Just a thought.
Also, there is a company in England who makes replacement diaphragms, nothing specifically for our STs tho. Been meaning to send them one of my defunct pieces to see if they will come up with something for us. Maybe this will tickle my 'round-to-it.